# hmmscan :: search sequence(s) against a profile database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query sequence file: test.faa
# target HMM database: /media/vol2/home/lmeunier/analyzes/HMMs/hmmdb/generic_domains.hmm
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: GCA_000520115.1|seq20553 [L=1723]
Scores for complete sequence (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Model Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-187 616.5 10.6 7.1e-125 408.6 5.9 2.1 2 AMP-binding_fungi
1.3e-138 453.4 0.3 2e-94 307.9 0.3 2.2 2 AMP-binding AMP-binding enzyme
1.1e-127 418.4 0.0 1.2e-47 153.8 0.0 3.1 3 A-OX
4.3e-66 214.5 20.8 4.9e-39 125.5 7.2 2.7 3 Condensation_fungi
2.3e-35 113.0 3.2 2.9e-19 60.7 0.1 2.6 2 PCP_fungi
1e-29 94.0 0.4 5e-15 47.0 0.0 2.7 2 PCP
2.6e-16 49.2 10.1 1.4e-09 26.9 3.6 3.7 3 CAL_domain
2.3e-11 35.3 0.1 1.3e-05 16.9 0.0 2.7 2 ACP
5.1e-05 14.5 0.1 0.016 6.5 0.0 2.6 2 ACP_beta
Domain annotation for each model (and alignments):
>> AMP-binding_fungi
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 210.7 0.1 8.8e-66 4.1e-65 286 506 .. 2 197 .. 1 198 [. 0.90
2 ! 408.6 5.9 1.5e-125 7.1e-125 2 506 .. 752 1218 .. 751 1219 .. 0.93
Alignments for each domain:
== domain 1 score: 210.7 bits; conditional E-value: 8.8e-66
AMP-binding_fungi 286 NgYGPTEttvistvn.vyvpssddsdfLktpsenIGrpvgnvrawvvDpndhnrLqpvPiGavGELlieGPgelARGYLndPekl 369
N YGP+E+++++++ ++ d + +IGrp+ nvr++++D +++ vP+G+vGEL++ G +++ GY+n P+
GCA_000520115.1|seq20553 2 NLYGPSECAIMTHCAqL---HA---D----APITIGRPLENVRSYILDNDQR--P--VPVGVVGELYL-GGMCVSPGYINLPDE- 70
99*************66...33...4....89***************99877..9..***********.556************. PP
AMP-binding_fungi 370 TaaaF........eggkwkgprdRlYrTGDLvRylnpDGsleeflGRIkDtdQVKiRGQRvELGEIEhhlraaasle........ 438
Ta +F + + ++rTGDL+R+++ DG++e lGR Dt QVK+ G+R+EL+E+ +++ ++
GCA_000520115.1|seq20553 71 TAVSFvpdpfvsgH--------PKMFRTGDLGRLRP-DGTFEL-LGR-QDT-QVKLKGYRIELDEVAGAML--HHPDvvsaavlv 141
**********9643........58**********99.******.***.**8.******************9..9999*******9 PP
AMP-binding_fungi 439 ...........essdllifvlplgvllelddelsrtalladlreaLsarLPsYMeVPsvfipvdslPltaSGKlDRkaL 506
+ +t +++l++ +a+LP Y +VP++++ v +P +++GK+D++aL
GCA_000520115.1|seq20553 142 kdkthlvgyfaP----------------------ATVSVDSLQRVVAAHLPVY-MVPAAWVGVAVMPQNSNGKIDKNAL 197
999877664321......................226667*************.77**********************9 PP
== domain 2 score: 408.6 bits; conditional E-value: 1.5e-125
AMP-binding_fungi 2 dlfeeqararPdapAvcdawDgsdlsqtslTeYaELdelsnrLAhhLvsslklGvvpggPedlVpvcfeKSawavVAiLeAIL 84
+ fe++a+++P apA+ ++ g+ +l Y+EL+e++n +A++L + +Gv +++V+v+++++ +++ A+L A+
GCA_000520115.1|seq20553 752 HSFEKRALSHPTAPAI--EFRGV-----TL-TYGELNEHANVMAAQLCA---MGV---CVGHRVGVLMDRCLEFPMALL-AVV 819
67**************..89984.....45.56**************96...8*9...9999****************6.5** PP
AMP-binding_fungi 85 KAGaAfVPLDPshPaaRlqaIledvgarklvLe................................espslaaptlpsvsPsqs 135
KAGa PLD++ Pa+R++++l d++ +lv+ + + ++++++
GCA_000520115.1|seq20553 820 KAGASMMPLDVAFPASRIKYMLADANV-SLVVTtgehrdvvesfrldvpllqaaisespahvhrvQ-S------KSTATST-- 892
***************************.********************************999974.4......6678885.. PP
AMP-binding_fungi 136 sddaAYviFTSGSTGkPKGVveieHralctsalahgkalglglspgsRvLQFasyaFDevSigEIfttLlnGGclCvPseeeR 218
d AYv++TSGS GkPKGV +++H+a+++ + ++ a g+ pg Rv QF ++ FD +++ + +L++G++l+ s +
GCA_000520115.1|seq20553 893 -D-EAYVVYTSGSMGKPKGV-PVTHAAAVNVIHFQSTATGFV--PGHRVMQFMAIGFDG-FQWDLWKALSSGATLVLRSHDFT 969
.6.9****************.99*****************66..8************99.*********************** PP
AMP-binding_fungi 219 lDpndLagainrelrvtwafLTPSvarlLladadrldPladvPsLktLevlGGEaltqevvdrW....eLiNgYGPTEttvis 297
++ +v + +TP+ ++ L +P ++P+L ++ ++GE ++ ++ d W + N YGP+E+++++
GCA_000520115.1|seq20553 970 ----------ADIKSVQAITCTPTALAQL--G----HP-TEYPNLVVVS-VAGESCPGALKDLWaphvRFMNLYGPSECAIMT 1034
..........99***************99..7....9*.99***99888.888*************8878************* PP
AMP-binding_fungi 298 tvn.vyvpssddsdfLktpsenIGrpvgnvrawvvDpndhnrLqpvPiGavGELlieGPgelARGYLndPeklTaaaF..... 374
++ ++ d + +IGrp+ nvr++++D +++ vP+G+vGEL++ G +++ GY+n P+ Ta +F
GCA_000520115.1|seq20553 1035 HCAqL---HA---D----APITIGRPLENVRSYILDNDQR--P--VPVGVVGELYL-GGMCVSPGYINLPDE-TAVSFvpdpf 1101
***66...33...4....89***************99877..9..***********.556************.********** PP
AMP-binding_fungi 375 ...eggkwkgprdRlYrTGDLvRylnpDGsleeflGRIkDtdQVKiRGQRvELGEIEhhlraaasle................ 438
+ + ++rTGDL+R+++ DG++e lGR Dt QVK+ G+R+EL+E+ +++ ++
GCA_000520115.1|seq20553 1102 vsgH--------PKMFRTGDLGRLRP-DGTFEL-LGR-QDT-QVKLKGYRIELDEVAGAML--HHPDvvsaavlvkdkthlvg 1170
9643........58**********99.******.***.**8.******************9..9999*******999987766 PP
AMP-binding_fungi 439 ...essdllifvlplgvllelddelsrtalladlreaLsarLPsYMeVPsvfipvdslPltaSGKlDRkaL 506
+ +t +++l++ +a+LP Y +VP++++ v +P +++GK+D++aL
GCA_000520115.1|seq20553 1171 yfaP----------------------ATVSVDSLQRVVAAHLPVY-MVPAAWVGVAVMPQNSNGKIDKNAL 1218
4321......................226667*************.77**********************9 PP
>> AMP-binding AMP-binding enzyme
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.6 0.0 3.1e-45 1.4e-44 284 418 .] 2 139 .. 1 139 [. 0.99
2 ! 307.9 0.3 4.3e-95 2e-94 1 418 [] 775 1160 .. 775 1160 .. 0.96
Alignments for each domain:
== domain 1 score: 143.6 bits; conditional E-value: 3.1e-45
EEE--GGGSSESEEEECGHHH-SSC---EBSTTTEEEEEBSTT-BEE-S----EEEESTTS--B-TT-HHHHHHHEEESTT-... CS
AMP-binding 284 ngYGltEttvivtvslpgdeetkpgsiGrplpgveikivdeegkevppgevGEllirgpsvakGYlkdpeltaeafvedgwk... 365
n+YG++E+ +++++++++++ p++iGrpl +v+ +i+d ++++vp+g+vGEl+++g +v GY + p++ta +fv+d++
GCA_000520115.1|seq20553 2 NLYGPSECAIMTHCAQLHAD--APITIGRPLENVRSYILDNDQRPVPVGVVGELYLGGMCVSPGYINLPDETAVSFVPDPFVsgh 84
89******************..9************************************************************** PP
..EEE---EEEE-TT--EEEEEGGGCEEEB---EEEHHHHHHHHHTSTTEEEEEE CS
AMP-binding 366 ..lyrTGDlgridedGyleiiGRkkdqvkirGeriepgeiEsvllehpgvaeaaV 418
++rTGDlgr+++dG++e++GR ++qvk++G+rie+ e+ ++l hp+v aaV
GCA_000520115.1|seq20553 85 pkMFRTGDLGRLRPDGTFELLGRQDTQVKLKGYRIELDEVAGAMLHHPDVVSAAV 139
*****************************************************98 PP
== domain 2 score: 307.9 bits; conditional E-value: 4.3e-95
EHHHHHHHHHHHHHHHHH----TT-EEEEE-SSSHHHHHHHHHHHHTT-EEEE--TTS-HHHHHHHHHHCTESEEEEESBCHC CS
AMP-binding 1 TYreldervnrlaagLrklGvkpgdrVaillpnspewviaflaclkaGavyvpvyptlpaerlayilndseakvlitddellt 83
TY+el+e++n +aa L + Gv+ g rV++l+++++e+ +a+la++kaGa +p++ +pa r++y+l+d+++++++t+ e+ +
GCA_000520115.1|seq20553 775 TYGELNEHANVMAAQLCAMGVCVGHRVGVLMDRCLEFPMALLAVVKAGASMMPLDVAFPASRIKYMLADANVSLVVTTGEHRD 857
9********************************************************************************** PP
CHHHHHHHHHCHHECCETTCCEESECCCCCCEHCHHHHGTSTSS-CCCSBTTTSEEEEEEE-------EEEEEEHHHHHHHHH CS
AMP-binding 84 klkeaaskelakealiivrsepaesvgeeellleleslkkasteppkvplkpddlayiiyTSGtTGkPKgVmlthrnllalva 166
+++ + + + +a es ++ + ++ k+ ++ d ay++yTSG+ GkPKgV +th++ ++ ++
GCA_000520115.1|seq20553 858 VVESFRLDVPLLQAA------------------ISESPAHVHRVQSKSTATSTDEAYVVYTSGSMGKPKGVPVTHAAAVNVIH 922
********9987654..................46788888888888888999****************************** PP
HHHHHHTTTTT.EEEEES-TTSTHHHCCCHHHHTTT-EEEEESSCCTCSHHHHHHHHHHTT-SEEEE-HHHHHHHHHHHHCCC CS
AMP-binding 167 giakrvglkpddrvlsllplafdgsvleilgplllGatlvlvspedlkdpalllddiekykvtvlalvptllelllkapekkk 249
++ g+ p++rv++++++ fdg+ ++++ +l +Gatlvl s + di+ v+ ++++pt+l +l +e
GCA_000520115.1|seq20553 923 FQSTATGFVPGHRVMQFMAIGFDGFQWDLWKALSSGATLVLRSHDF-------TADIKS--VQAITCTPTALAQLGHPTE--- 993
*****************************************99777.......466664..7799**********99998... PP
TTTTT--EEEE-----THHHHHHHHHHCTTSEEEEEE--GGGSSESEEEECGHHH-SSC---EBSTTTEEEEEBSTT-BEE-S CS
AMP-binding 250 ldlsslrlilsggeplspellrrlreafggipivngYGltEttvivtvslpgdeetkpgsiGrplpgveikivdeegkevppg 332
++l ++ ++ge ++ +l + ++ +++++n+YG++E+ +++++++++++ p++iGrpl +v+ +i+d ++++vp+g
GCA_000520115.1|seq20553 994 --YPNLVVVSVAGESCPGALKDLWAP---HVRFMNLYGPSECAIMTHCAQLHAD--APITIGRPLENVRSYILDNDQRPVPVG 1069
..9**********************6...678**********************..9************************** PP
----EEEESTTS--B-TT-HHHHHHHEEESTT-.....EEE---EEEE-TT--EEEEEGGGCEEEB---EEEHHHHHHHHHTS CS
AMP-binding 333 evGEllirgpsvakGYlkdpeltaeafvedgwk.....lyrTGDlgridedGyleiiGRkkdqvkirGeriepgeiEsvlleh 410
+vGEl+++g +v GY + p++ta +fv+d++ ++rTGDlgr+++dG++e++GR ++qvk++G+rie+ e+ ++l h
GCA_000520115.1|seq20553 1070 VVGELYLGGMCVSPGYINLPDETAVSFVPDPFVsghpkMFRTGDLGRLRPDGTFELLGRQDTQVKLKGYRIELDEVAGAMLHH 1152
*********************************************************************************** PP
TTEEEEEE CS
AMP-binding 411 pgvaeaaV 418
p+v aaV
GCA_000520115.1|seq20553 1153 PDVVSAAV 1160
******98 PP
>> A-OX
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 145.2 0.0 1e-45 4.7e-45 640 780 .] 2 139 .. 1 139 [. 0.97
2 ! 116.3 0.4 5.6e-37 2.6e-36 1 198 [. 775 974 .. 775 981 .. 0.87
3 ! 153.8 0.0 2.6e-48 1.2e-47 587 780 .] 976 1160 .. 969 1160 .. 0.90
Alignments for each domain:
== domain 1 score: 145.2 bits; conditional E-value: 1e-45
A-OX 640 nmyGPtettiWstvaaleeaeaavvsiGrpiantqlyvldaalrpvpvGveGelyiGGeGvtrGylkrpeLtaerfipdpfakee 724
n+yGP e +i + +a+l+++ +++iGrp+ n + y+ld+++rpvpvGv Gely+GG v+ Gy++ p+ ta f+pdpf++
GCA_000520115.1|seq20553 2 NLYGPSECAIMTHCAQLHADA--PITIGRPLENVRSYILDNDQRPVPVGVVGELYLGGMCVSPGYINLPDETAVSFVPDPFVS-G 83
9****************9986..***********************************************************9.6 PP
A-OX 725 garlyrtGDlvrlradGrleflGrvDhqvklrGfrielgeieaalealpgvreavv 780
+++rtGDl+rlr+dG+ e lGr+D+qvkl+G+riel e+ a+ ++p+v a+v
GCA_000520115.1|seq20553 84 HPKMFRTGDLGRLRPDGTFELLGRQDTQVKLKGYRIELDEVAGAMLHHPDVVSAAV 139
89*************************************************99876 PP
== domain 2 score: 116.3 bits; conditional E-value: 5.6e-37
A-OX 1 tyaeldaranelaaeLrelGvgpgervgllversvelvvgalgilkaGgayvPldpayPadrlallleDsgasvvltqeklaekL 85
ty el+++an +aa+L ++Gv g+rvg+l++r +e+ +++l+++kaG++ +Pld a+Pa r++++l+D++ s+v+t+ ++++ +
GCA_000520115.1|seq20553 775 TYGELNEHANVMAAQLCAMGVCVGHRVGVLMDRCLEFPMALLAVVKAGASMMPLDVAFPASRIKYMLADANVSLVVTTGEHRDVV 859
89*********************************************************************************99 PP
A-OX 86 peadakvvvldae..erlaaaaeaapasavkpddlayviytsGstGrPkGvlvehrnvanffaamDeridkeeagvWLavtslsf 168
+ +++v +l+a+ e+ a+ ++ +++s++++ d ayv+ytsGs G+PkGv v+h+ ++n + + + ++ + ++ f
GCA_000520115.1|seq20553 860 ESFRLDVPLLQAAisESPAHVHRVQSKSTATSTDEAYVVYTSGSMGKPKGVPVTHAAAVNVIHFQSTATGFVPGHRVMQFMAIGF 944
999999999988622556677788889999999**********************976665555555545555555555666789 PP
A-OX 169 DisvlellwtlarGfkvvlsgeesrallsa 198
D +l+ +l+ G ++vl++++ +a + +
GCA_000520115.1|seq20553 945 DGFQWDLWKALSSGATLVLRSHDFTADIKS 974
9999***************99988776654 PP
== domain 3 score: 153.8 bits; conditional E-value: 2.6e-48
A-OX 587 thlqCtPslarllvaeeearaalkrlkkllvGGealpgaLakelreatkaevlnmyGPtettiWstvaaleeaeaavvsiGrp 669
+ CtP+++ l e +l + v Ge+ pgaL + +n+yGP e +i + +a+l+++ +++iGrp
GCA_000520115.1|seq20553 976 QAITCTPTALAQLGHPTE----YPNLVVVSVAGESCPGALKDLWAPH--VRFMNLYGPSECAIMTHCAQLHADA--PITIGRP 1050
556677776665554443....346778899********98766554..5799*****************9986..******* PP
A-OX 670 iantqlyvldaalrpvpvGveGelyiGGeGvtrGylkrpeLtaerfipdpfakeegarlyrtGDlvrlradGrleflGrvDhq 752
+ n + y+ld+++rpvpvGv Gely+GG v+ Gy++ p+ ta f+pdpf++ +++rtGDl+rlr+dG+ e lGr+D+q
GCA_000520115.1|seq20553 1051 LENVRSYILDNDQRPVPVGVVGELYLGGMCVSPGYINLPDETAVSFVPDPFVS-GHPKMFRTGDLGRLRPDGTFELLGRQDTQ 1132
****************************************************9.689************************** PP
A-OX 753 vklrGfrielgeieaalealpgvreavv 780
vkl+G+riel e+ a+ ++p+v a+v
GCA_000520115.1|seq20553 1133 VKLKGYRIELDEVAGAMLHHPDVVSAAV 1160
***********************99876 PP
>> Condensation_fungi
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 125.5 7.2 1.1e-39 4.9e-39 5 208 .. 316 594 .. 314 595 .. 0.94
2 ? -2.8 0.0 1.1 5 119 137 .. 1284 1302 .. 1256 1303 .. 0.75
3 ! 96.7 3.0 6.1e-31 2.9e-30 3 208 .. 1331 1608 .. 1330 1609 .. 0.94
Alignments for each domain:
== domain 1 score: 125.5 bits; conditional E-value: 1.1e-39
Condensation_fungi 5 iyPctPlQegllalslksppspvekgaavgdsrYvasfvlrlpssdsdggpvdldrLkaAWkeavvqrhpiLRTrFvedsgglpr 89
+y +t+lQ +++ ++l+ +a Yv ++ +l+ + + ++r+ +A +e++++ h+iLRT+Fv ++
GCA_000520115.1|seq20553 316 VYLATSLQASMIFATLSR------RDA------YVFQHHMQLT------STLHAARVLSA-FERLARVHDILRTTFVN-LPS--- 377
7889**************......***......*********5......44*********.77***************.542... PP
Condensation_fungi 90 dggdklspfk.................................................kgsgehrrsavylvltiHHalyDGwS 125
g + ++ vlt+HHa+yDGw+
GCA_000520115.1|seq20553 378 -G------VHgvvhadfdrfpvihtaansiheflesdrrrgfevgdgnfsrlsivelptA---------TFSVLTMHHAVYDGWT 446
.2......34556899***************************************99643.........888************* PP
Condensation_fungi 126 lplllrdLeaaYk........................................................................ 138
+ +llrdL+ ++
GCA_000520115.1|seq20553 447 IAMLLRDLHNVLHgvplvprpsfcrvidfiqaqdkreterfwraylkgvtchslnlttsstasnvpttsppsvsialdvnemraa 531
************************************************************************************* PP
Condensation_fungi 139 ............kAAWAaahylvLarargyNvytsgk.sdDVvFGtvvsGRdnapvpgeiedlserivGPfinktvPvRvrld 208
++WA l+L+ y + +DVvFG v+s+R n+pv + ++ ri G +i tvP+Rv++d
GCA_000520115.1|seq20553 532 arrvgltlaeftRLVWA----LTLRK---Y------MrHNDVVFGHVLSNR-NIPVVD-VT----RILGAMI-STVPCRVTFD 594
*****************....****9...9......5488***********.99****.**....5******.99******98 PP
== domain 2 score: -2.8 bits; conditional E-value: 1.1
Condensation_fungi 119 alyDGwSlplllrdLeaaY 137
++yD ++++l + ++ a+
GCA_000520115.1|seq20553 1284 SVYDLLTWNILSQVVATAL 1302
59********999888765 PP
== domain 3 score: 96.7 bits; conditional E-value: 6.1e-31
Condensation_fungi 3 ediyPctPlQegllalslksppspvekgaavgdsrYvasfvlrlpssdsdggpvdldrLkaAWkeavvqrhpiLRTrFvedsg 85
e +P+t Qe+++ + ++ ++a +v ++vl+l + ++dl ++k ++++v+ +iLR++Fv +
GCA_000520115.1|seq20553 1331 ESCFPATLEQESMVGTIATA------PSA------FVFQMVLEL-----G-QDLDLVAIK---YQHLVAQREILRSTFVS-T- 1390
7889***********97777......889......*********.....6.668888888...999**************.7. PP
Condensation_fungi 86 glprdggdklspfk..............................................kgsgehrrsavylvltiHHalyD 122
+gg ++ ++g r + v+tiHHalyD
GCA_000520115.1|seq20553 1391 ----EGG-----LYhvvqssslhvpvarasvatlmdflsadlqraftlddhafarftivqDDRG---R--AHGVVTIHHALYD 1459
....444.....455********************************************94455...5..888********** PP
Condensation_fungi 123 GwSlplllrdLeaaYk................................................................... 138
G S+ +l d+e+a+
GCA_000520115.1|seq20553 1460 GASITMLRGDIEDALLgrqlacrppfrhvveyiaaqdsslaerywtryldgickptlvacvppfidpppmnealvatlilpni 1542
************999999***************************************************************** PP
Condensation_fungi 139 ...............kAAWAaahylvLarargyNvytsgksdDVvFGtvvsGRdnapvpgeiedlserivGPfinktvPvRvr 206
++AWA +L+r + + dDVvFG vvs+R ++pv + +e + G++i vP+Rv
GCA_000520115.1|seq20553 1543 sialkridvsmaalvNLAWA----TTLRR---Q---L--CIDDVVFGQVVSNR-SIPVIE-VE--K--TLGCLI-SSVPCRVE 1606
********************....****8...6...5..8*************.99****.**..7..******.55*****9 PP
Condensation_fungi 207 ld 208
+d
GCA_000520115.1|seq20553 1607 FD 1608
98 PP
>> PCP_fungi
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 60.7 0.1 6.2e-20 2.9e-19 1 85 [. 215 280 .. 215 281 .. 0.94
2 ! 52.1 0.8 2.7e-17 1.3e-16 1 84 [. 1236 1300 .. 1236 1302 .. 0.90
Alignments for each domain:
== domain 1 score: 60.7 bits; conditional E-value: 6.2e-20
PCP_fungi 1 rklrelWaevLglprsipppseaaekaskIglddsFfsLGGDSIsAmrLvsaklrsRkellGsisqlsvadifrsptladlAala 85
++++++W++vLg+ + + Ig+ +sFf+LGGDS+sA+++++ + R G ++ l v++ ++sp l + A+la
GCA_000520115.1|seq20553 215 KRMAQIWSDVLGV-----SL----H---DIGRRTSFFALGGDSMSAIHVAA-TC--R-HD-G-YD-LMVSEFLKSPELCQAAELA 280
589**********.....75....6...***********************.88..*.**.*.**.**********999999876 PP
== domain 2 score: 52.1 bits; conditional E-value: 2.7e-17
PCP_fungi 1 rklrelWaevLglprsipppseaaekaskIglddsFfsLGGDSIsAmrLvsaklrsRkellGsisqlsvadifrsptladlAa 83
++++++W++vLg+ + + Ig+ +sFf+LGGDS+sA r+v ++ + ++ ++ +sv d++ l++ +a
GCA_000520115.1|seq20553 1236 KRMAQIWSDVLGV-----SL----H---DIGRRTSFFALGGDSMSALRVVKLC---K-DA-R-LH-ISVYDLLTWNILSQVVA 1299
589**********.....75....6...***********************88...9.77.7.**.******99888888777 PP
PCP_fungi 84 l 84
+
GCA_000520115.1|seq20553 1300 T 1300
6 PP
>> PCP
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 47.0 0.0 1.1e-15 5e-15 1 69 [. 214 283 .. 214 284 .. 0.95
2 ! 44.6 0.1 5.7e-15 2.7e-14 1 61 [. 1235 1296 .. 1235 1302 .. 0.91
Alignments for each domain:
== domain 1 score: 47.0 bits; conditional E-value: 1.1e-15
PCP 1 EteLaeiwaevLgve..rVgidDdFFelGGhSLlatrliarirqelgvelsvkdLfaaptvaalaallsed 69
E+++a+iw++vLgv +g++ +FF+lGG+S+ a+ ++a r+ g++l v++ +++p++ + a+l++++
GCA_000520115.1|seq20553 214 EKRMAQIWSDVLGVSlhDIGRRTSFFALGGDSMSAIHVAATCRH-DGYDLMVSEFLKSPELCQAAELAERS 283
899***********9889**************************.****************9999998775 PP
== domain 2 score: 44.6 bits; conditional E-value: 5.7e-15
PCP 1 EteLaeiwaevLgve..rVgidDdFFelGGhSLlatrliarirqelgvelsvkdLfaaptvaa 61
E+++a+iw++vLgv +g++ +FF+lGG+S+ a r+++ + +++++sv dL++ + +
GCA_000520115.1|seq20553 1235 EKRMAQIWSDVLGVSlhDIGRRTSFFALGGDSMSALRVVKLCKD-ARLHISVYDLLTWNILSQ 1296
899***********9889************************99.**********98766555 PP
>> CAL_domain
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 11.9 0.1 1.1e-05 5e-05 369 431 .. 45 107 .. 41 109 .. 0.86
2 ! 26.9 3.6 3.1e-10 1.4e-09 1 156 [. 775 914 .. 775 916 .. 0.90
3 ! 11.9 0.1 1.1e-05 5e-05 369 431 .. 1066 1128 .. 1062 1130 .. 0.86
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 1.1e-05
CAL_domain 369 vppGeeGEiWvkGPnvmrGYLhnqPeataqaLrsilhtddDGW.......yRTGDLGrraeaGnltvTGR 431
vp G +GE++ G v GY n P +ta ++ D++ +RTGDLGr++ G + + GR
GCA_000520115.1|seq20553 45 VPVGVVGELYLGGMCVSPGY-INLPDETAVSFVP------DPFvsghpkmFRTGDLGRLRPDGTFELLGR 107
899*****************.************9......99866666667*******986688777777 PP
== domain 2 score: 26.9 bits; conditional E-value: 3.1e-10
CAL_domain 1 syaeLerrarrlAGhLqdlGlkpGdrVvillgnrvefVeayLAclrAgaVAVPlnpdsadaelahllrdsGiravltdaAhaavL 85
+y+eL + a +A+ L ++G+ G rV +l+ ef a+LA++ Aga Pl+ +++l+d+++ +v+t h +v
GCA_000520115.1|seq20553 775 TYGELNEHANVMAAQLCAMGVCVGHRVGVLMDRCLEFPMALLAVVKAGASMMPLDVAFPASRIKYMLADANVSLVVTTGEHRDVV 859
8********************************************************************************8888 PP
CAL_domain 86 dkvrrtapalalvdahaagrelagfasyeelatpesalpArDDPvlglDelAwmlYTSGsTGrPKGVlsth 156
r + p l+ + +a ++ + +t s + A+ YTSGs G+PKGV +th
GCA_000520115.1|seq20553 860 ESFRLDVPLLQAA-I---SESPAHVHRVQSKSTATSTDE------------AYVVYTSGSMGKPKGVPVTH 914
6666666655555.4...477888888887777777777............*******************9 PP
== domain 3 score: 11.9 bits; conditional E-value: 1.1e-05
CAL_domain 369 vppGeeGEiWvkGPnvmrGYLhnqPeataqaLrsilhtddDGW.......yRTGDLGrraeaGnltvTGR 431
vp G +GE++ G v GY n P +ta ++ D++ +RTGDLGr++ G + + GR
GCA_000520115.1|seq20553 1066 VPVGVVGELYLGGMCVSPGY-INLPDETAVSFVP------DPFvsghpkmFRTGDLGRLRPDGTFELLGR 1128
899*****************.************9......99866666667*******986688777777 PP
>> ACP
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.6 0.0 7.3e-06 3.4e-05 5 41 .. 218 253 .. 214 271 .. 0.89
2 ! 16.9 0.0 2.9e-06 1.3e-05 5 41 .. 1239 1274 .. 1235 1286 .. 0.91
Alignments for each domain:
== domain 1 score: 15.6 bits; conditional E-value: 7.3e-06
ACP 5 reevaavlglasasdvdpdraFkdlGvDSltaveLrn 41
+ + +vlg+ s +d+ +++F+ lG DS+ a+ +
GCA_000520115.1|seq20553 218 AQIWSDVLGV-SLHDIGRRTSFFALGGDSMSAIHVAA 253
678999****.*********************98876 PP
== domain 2 score: 16.9 bits; conditional E-value: 2.9e-06
ACP 5 reevaavlglasasdvdpdraFkdlGvDSltaveLrn 41
+ + +vlg+ s +d+ +++F+ lG DS+ a+++++
GCA_000520115.1|seq20553 1239 AQIWSDVLGV-SLHDIGRRTSFFALGGDSMSALRVVK 1274
678999****.**********************9975 PP
>> ACP_beta
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 5.3 0.0 0.0081 0.038 4 35 .. 218 249 .. 215 265 .. 0.88
2 ! 6.5 0.0 0.0034 0.016 4 57 .. 1239 1291 .. 1236 1299 .. 0.74
Alignments for each domain:
== domain 1 score: 5.3 bits; conditional E-value: 0.0081
ACP_beta 4 resLaeaLyleeeeidedaaFvdlGLDSiigv 35
++ +++L ++ ++i ++++F lG DS ++
GCA_000520115.1|seq20553 218 AQIWSDVLGVSLHDIGRRTSFFALGGDSMSAI 249
5667899*********************9887 PP
== domain 2 score: 6.5 bits; conditional E-value: 0.0034
ACP_beta 4 resLaeaLyleeeeidedaaFvdlGLDSiigveWvrainkryglsleatkvYdy 57
++ +++L ++ ++i ++++F lG DS ++ v+ + k +l++++ ++ ++
GCA_000520115.1|seq20553 1239 AQIWSDVLGVSLHDIGRRTSFFALGGDSMSALRVVK-LCKDARLHISVYDLLTW 1291
5667899**********************9998554.44555666666555555 PP
Internal pipeline statistics summary:
-------------------------------------
Query sequence(s): 1 (1723 residues searched)
Target model(s): 42 (9739 nodes)
Passed MSV filter: 10 (0.238095); expected 0.8 (0.02)
Passed bias filter: 10 (0.238095); expected 0.8 (0.02)
Passed Vit filter: 10 (0.238095); expected 0.0 (0.001)
Passed Fwd filter: 9 (0.214286); expected 0.0 (1e-05)
Initial search space (Z): 42 [actual number of targets]
Domain search space (domZ): 9 [number of targets reported over threshold]
# CPU time: 0.08u 0.02s 00:00:00.10 Elapsed: 00:00:00.10
# Mc/sec: 167.80
//
[ok]