JILLROWE / BioX-Workflow-1.10 / Changes 
Revision history for BioX-Workflow

1.10  2016-08-31 06:58:14 GST
    - Added github pages to Usage Docs

1.0.2  2016-06-17 10:22:09 GST
    - Added fix for arrays or hashes in workflow config
    - Added documentation for select_rules and match_rules
    - Refactored code into Moose roles
    - Added getopt option for plugins

1.0.1  2016-06-08 10:33:36 GST
    - Added fix for when file supplied by --workflow doesn't exist

1.0  2016-06-06 15:19:54 GST
    - Migrating to github
    - Added fix for when using --select_rules that INPUT/OUTPUT are still looped

0.27  2016-04-25 11:54:18 GST
    - Added fix for saving env only as a var

0.26  2016-04-24 14:35:27 GST
    - Added option to number rules 001,002,003, etc

0.25  2016-02-18 14:20:03 GST
    - Made major changes and updates to documentation

0.24  2016-02-18 12:14:28 GST
    - Added bugfix for wait: 0

0.23  2016-01-21 12:12:41 GST
    - Stupid regexp were broken

0.22  2016-01-20 11:38:49 GST
    - Made change so indir/outdir, and any vars ending in _dir will be coereced
      as absolute path

0.21  2016-01-04 12:14:12 GST
    - Added minmode, like in Drake

0.20  2015-12-23 10:08:58 GST
    - Made a change to looking at dirs for samples

0.19  2015-12-16 13:55:12 GST
    - Added Slurp to dependencies

0.18  2015-12-09 13:32:02 GST
    - Fixed a test - samples were in a different order each time...

0.17  2015-12-09 12:49:15 GST
    - Wrote tests and made a fix for local vars

0.16  2015-11-30 10:45:01 GST
    - Bug fix on special indir/outdir vars

0.15  2015-11-29 11:28:25 GST
    Bug fix - Data::Pairs making shallow copies so added Storable to cpanfile

0.14  2015-11-25 12:19:54 GST
    Made some more changes to local_attr and outdir/indir

0.13  2015-11-25 10:53:46 GST
    Made some changes to local attr

0.12  2015-11-23 10:09:39 GST
    - Added global attr to eval call

0.11  2015-11-22 13:01:23 GST
    - Fixed override process

0.10  2015-11-19 12:37:46 GST
    - Lots of code refactoring for new plugin system!

0.09  2015-11-15 12:52:24 GST
    - Bug fix for by_sample_dir and evaling indirs/outdirs with Text::Template

0.08  2015-11-11 11:22:42 GST
    - Added in a BUG fix for indir/outdir not having a clearer method
    - WHY DONT I JUST USE LAZY_BUILD

0.07  2015-11-11 10:39:37 GST
    - Added in a feature for all local variables to evaluated in process template, not just INPUT/OUTPUT
    - INPUT/OUTPUT, indir/outdir are still special variables
    - Can now do things like
    - local:
        - MYLOCALTHING: "{$self->indir}/{$sample}_MYLOCALTHING.txt"

0.05  2015-11-10 11:53:21 GST
    - Missing carp::always
    - Commited bug fix with camelized rules - rule_R1 was being changed to rule_r1 in file changes

0.04  2015-11-10 10:02:44 GST
    - Missing dep in cpanfile

0.03  2015-11-09 12:54:58 GST
    - Added in some support for different output structures

0.02  2015-11-09 11:58:29 GST
    - Commiting bug fix. INPUT/OUTPUT should not be required

0.01  2015-06-23 12:41:10 AST
    - Initial release