.gitattributes
.gitignore
bin/convert-pheno
Changes
CITATION.cff
cpanfile
Dockerfile
lib/Convert/Pheno.pm
lib/Convert/Pheno/Bff2Omop.pm
lib/Convert/Pheno/Bff2Pxf.pm
lib/Convert/Pheno/CDISC.pm
lib/Convert/Pheno/CSV.pm
lib/Convert/Pheno/DB/Similarity.pm
lib/Convert/Pheno/DB/SQLite.pm
lib/Convert/Pheno/IO/CSVHandler.pm
lib/Convert/Pheno/IO/FileIO.pm
lib/Convert/Pheno/OMOP.pm
lib/Convert/Pheno/OMOP/Definitions.pm
lib/Convert/Pheno/PXF.pm
lib/Convert/Pheno/RDF.pm
lib/Convert/Pheno/REDCap.pm
lib/Convert/Pheno/Utils/Default.pm
lib/Convert/Pheno/Utils/Mapping.pm
lib/Convert/Pheno/Utils/Schema.pm
lib/convertpheno.py
LICENSE
Makefile.PL
MANIFEST			This list of files
mkdocs.yml
share/db/cdisc.db
share/db/concepts_candidates_2_exposure.csv
share/db/hpo.db
share/db/icd10.db
share/db/ncit.db
share/db/omim.db
share/db/README
share/ex/perl.pl
share/ex/python.py
share/schema/mapping.json
t/args.t
t/bff2csv/out/individuals.csv
t/bff2jsonf/out/individuals.fold.json
t/bff2pxf/in/individuals.json
t/bff2pxf/in/README
t/bff2pxf/out/pxf.json
t/cdisc2bff/in/cdisc_odm_data.xml
t/cdisc2bff/in/cdisc_odm_dictionary.csv
t/cdisc2bff/in/README
t/cdisc2bff/out/individuals.json
t/cdisc2pxf/out/pxf.json
t/cli.t
t/csv2bff/in/csv_data.csv
t/csv2bff/in/csv_mapping.yaml
t/csv2bff/out/individuals.json
t/csv2omop/out/csv_CONDITION_OCCURRENCE.csv
t/csv2omop/out/csv_DRUG_EXPOSURE.csv
t/csv2omop/out/csv_MEASUREMENT.csv
t/csv2omop/out/csv_OBSERVATION.csv
t/csv2omop/out/csv_PERSON.csv
t/csv2pxf/out/pxf.json
t/mapping.t
t/module.t
t/omop2bff/in/CONCEPT.csv
t/omop2bff/in/DRUG_EXPOSURE.csv
t/omop2bff/in/gz/CONCEPT.csv.gz
t/omop2bff/in/gz/DRUG_EXPOSURE.csv.gz
t/omop2bff/in/gz/omop_cdm_eunomia.sql.gz
t/omop2bff/in/gz/PERSON.csv.gz
t/omop2bff/in/omop_cdm_eunomia.sql
t/omop2bff/in/PERSON.csv
t/omop2bff/in/README
t/omop2bff/out/individuals.json
t/omop2bff/out/individuals_csv.json.gz
t/omop2bff/out/individuals_drug_exposure.json.gz
t/omop2bff/out/ohdsi.json
t/omop2pxf/out/pxf.json
t/pxf2bff/in/pxf.json
t/pxf2bff/in/pxf.yaml
t/pxf2bff/in/README
t/pxf2bff/out/individuals.json
t/pxf2bff/out/individuals.yaml
t/pxf2csv/out/pxf.csv
t/pxf2jsonf/out/pxf.fold.json
t/redcap2bff/err/redcap_mapping_err1.yaml
t/redcap2bff/err/redcap_mapping_err2.yaml
t/redcap2bff/err/redcap_mapping_err3.yaml
t/redcap2bff/err/redcap_mapping_err4.yaml
t/redcap2bff/err/redcap_mapping_err5.yaml
t/redcap2bff/in/redcap_data.csv
t/redcap2bff/in/redcap_dictionary.csv
t/redcap2bff/in/redcap_mapping.yaml
t/redcap2bff/out/individuals.json
t/redcap2pxf/out/pxf.json
t/schema/malformed.json
t/stream.t
VERSION
xt/bff2omop.t
xt/csv2omop.t
xt/ohdsi.t
xt/protobuff.t
META.yml                                 Module YAML meta-data (added by MakeMaker)
META.json                                Module JSON meta-data (added by MakeMaker)