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<title>Sample Configuraton Files</title>
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<h1>Sample Configuration Files</h1>
<p>
This directory contains sample configuration files for <a
href="http://www.gmod.org/ggb">GBrowse</a>. To use them, simply copy
them into gbrowse.conf, and edit the name of the database, username
and password to reflect your database set up:
<pre>
db_args = -adaptor dbi::mysqlopt
-dsn dbi:mysql:database=fly;host=localhost
<b>^^^change this</b>
user = nobody
<b>^^^^^^ and this</b>
pass = secret
<b>^^^^^^ and this</b>
</pre>
<p>
<dl>
<dt><a href="01.yeast.conf">01.yeast.conf</a>
<dd>Saccharomyces cerevisiae from SGD
<dt><a href="02.wormbase.conf">02.wormbase.conf</a>
<dd>Caenorhabditis elegans from WormBase
<dt><a href="03.fly.conf">03.fly.conf</a>
<dd>Drosophila melanogaster from FlyBase/BDGP
<dt><a href="04.human.conf">04.human.conf</a>
<dd>Homo sapiens from various sources (download from www.gmod.org)
<dt><a href="05.embl.conf">05.embl.conf</a>
<dd>A proxy that automatically downloads whole accessions from Genbank/EMBL
<dt><a href="06.biosql.conf">06.biosql.conf</a>
<dd>Sample configuration file for users of BioSQL
<dt><a href="07.chado.conf">07.chado.conf</a>
<dd>Sample configuration file for users of Chado
<dt><a href="08.genbank.conf">08.genbank.conf</a>
<dd>Sample configuration file for data converted from GenBank/EMBL format using
the bp_genbank2gff.pl script.
</dl>
<hr>
<address>Lincoln D. Stein, lstein@cshl.org<br>
<a href="/">Cold Spring Harbor Laboratory</a></address>
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Last modified: Tue Dec 23 17:43:27 EST 2003
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