/ 
Bio-Biblio-1.70
River stage zero No dependents
/ Bio::Biblio::PubmedJournalArticle

NAME

Bio::Biblio::PubmedJournalArticle - representation of a PUBMED journal article

VERSION

version 1.70

SYNOPSIS

  $obj = Bio::Biblio::PubmedJournalArticle->new(

                # some attributes from MedlineJournalArticle
                -title => 'Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.',
                -journal => Bio::Biblio::MedlineJournal->new(-issn => '0027-8424'),
                -volume => 96,
                -issue => 7,

                # and some from PubmedArticle
                -pubmed_history_list =>
                     [ { 'pub_status' => 'pubmed',
                         'date' => '2001-12-1T10:0:00Z' },
                       { 'pub_status' => 'medline',
                         'date' => '2002-1-5T10:1:00Z' } ],
                 -pubmed_status => 'ppublish');
#--- OR ---

  $obj = Bio::Biblio::PubmedJournalArticle->new();
  $obj->title ('...');
  $obj->journal (Bio::Biblio::MedlineJournal->new(-issn => '0027-8424'));
  $obj->pubmed_status ('ppublish');

DESCRIPTION

A storage object for a PUBMED journal article. See its place in the class hierarchy in http://www.ebi.ac.uk/~senger/openbqs/images/bibobjects_perl.gif

Attributes

There are no specific attributes in this class (however, you can set and get all attributes defined in the parent classes).

SEE ALSO

  • OpenBQS home page

    http://www.ebi.ac.uk/~senger/openbqs/

  • Comments to the Perl client

    http://www.ebi.ac.uk/~senger/openbqs/Client_perl.html

FEEDBACK

Mailing lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Support

Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

https://redmine.open-bio.org/projects/bioperl/

LEGAL

Authors

Martin Senger <senger@ebi.ac.uk>

This software is Copyright (c) by 2002 European Bioinformatics Institute and released under the license of the same terms as the perl 5 programming language system itself