NAME
GO::View::GD - a helper class for GO::View to deal with the image
SYNOPSIS
use GO::View::GD;
To instantiate a new GO::View::GD object, you may use following syntax:
my $gd = GO::View::GD->new(width => $imgWidth,
height => $imgHeight);
my $im = $gd->im; my $white = $gd->white; my $red = $gd->red;
and more ......
new
Title : new
Function : Creates a new GO::View::GD object
: recognized named parameters are height and width
both of which must be provided.
Returns : a GO::View::GD object
Args : the named parameters
im
This method returns the internal GD::Image object
height
This method returns the height that was used to instantiate the object
width
This method returns the width that was used to instantiate the object
white1 =head2 black
blue =head2 blue1 =head2 blue2 =head2 blue3 =head2 blue4 =head2 blue5
lightBlue =head2 darkBlue
darkGreen =head2 green =head2 green1 =head2 green2 =head2 green3 =head2 green4 =head2 green5
grey =head2 darkGrey =head2 lightGrey
magenta =head2 magenta1 =head2 magenta2 =head2 magenta3 =head2 magenta4 =head2 magenta5
maroon
orange =head2 orange1
red =head2 red1 =head2 red2 =head2 red3 =head2 red4
tan =head2 tan1
white
yellow =head2 yellow1 =head2 yellow2 =head2 yellow3
chartreuse
cenColor
sagecolor1 =head2 sagecolor2 =head2 sagecolor3 =head2 sagecolor4
drawFrameWithLabelAndDate
This method draws a blue frame around the image with date at the right bottom corner and image label on the left bottom corner if there is a label passed in. The date and label will be printed in red
Usage:
$gd->drawFrameWithLabelAndDate;
Optional arguments:
'date', which is a string indicating the date, otherwise the current date will be determined and used. The date will be printed in red in the lower right hand corner.
'text', which is a string that can be used to label the image. This will printed in the lower left hand corner of the image.
drawBar
This method draws a rectangle for a given coordinate set and creates a link for the box if there is a linkUrl passed in. The link for the box is in the form of text that can be placed in an image map on an html page. The text for that is currently printed to STDOUT.
Usage:
$gd->drawBar(barColor => $gd->blue,
numX1 => $X1,
numX2 => $X2,
numY => $Y,
linkUrl => $linkUrl,
barHeight => $barHeight,
outline => 1,
arrow => 'up');
Required Arguments:
barColor : The color of the box numX1 : The left-hand x-coordinate of the box numX2 : The right-hand x-coordinate of the box numY : The top y coorinate of the box
Optional Arguments:
strand : ??? - left over from use in SGDs ORF Map linkUrl : A url to which you would like the box to be linked barHeight : The height of the box - will be used to determine the bottom y-coordinate of the box - default is 4 pixels outlineColor : The color in which to outline the box onInfoText : Information text that can used for mouseovers
arrow : The type of arrowhead desired on the box. One of up, down, left, right, which indicates the direction in which the arrow head should point arrowHeight : The height of the arrowhead
drawName
This method draws a string and creates a link for it if there is a linkUrl passed in. The link is in the form of text that can be placed in an image map on an html page. The text for that is currently printed to STDOUT.
Usage:
$gd->drawName(name=>" = GO term with child(ren)",
nameColor=>$gd->black,
numX1=>$numX1,
numY=>$y-2);
Required Arguments:
name : The text that should be printed on the image nameColor : The color in which the text should be written numX1 : The X-coordinate where the text should be printed numY : The Y-coordinate where the text should be printed
Optional Arguments
linkUrl : A url to which you would like the text to be linked
imageMap
Title : imageMap
Usage : my $map = $goView->imageMap;
Function : returns the text that constitutes an image map for the
created image.
During creation of various glyphs, that have had a URL
passed in to which they could link, text that can be used
as an image map for the image, within a web page, will be
generated. When all glyphs have been added to the image,
you can retrieve the image map text. It then needs to be
wrapped in a <MAP>...</MAP> declaration, and the html that
displays the image will need to refer to the image, eg:
<MAP NAME='blah'>
_IMAGE_MAP_TEXT_HERE_
</MAP>
<img src='http::/some.url.here/xxx/gif' usemap='#blah'>
Note that the map and the usemap tag have the same name.
Returns : a string
_appendToMap
This protected method appends the passed in string onto the image map that is generated for the image that is also created by this module
Usage:
$self->_appendToMap($text);
AUTHOR
Shuai Weng (shuai@genome.stanford.edu)