NAME

make_image_from_bioconda - Create a Singularity/Apptainer image from micromamba

VERSION

version 0.9.0

SYNOPSIS

make_image_from_bioconda [options] packageName=version ...

DESCRIPTION

Create a Singularity/Apptainer image from a single micromamba package.

Multiple packages can be provided, but it's recommended to decide a sensible output name in that case.

OPTIONS

-o, --output FILENAME

The name of the output image file. Default: package__version.simg

-d, --def FILENAME

The name of the definition file [optional, experimental]

-m, --move

Move to the Core Bioinformatics repository after building. See the --dest option.

--dest PATH

The destination directory for the image file. Default: /qib/platforms/Informatics/transfer/outgoing/singularity/core/, or default_dest in the configuration.

-v, --verbose

Verbose output

AUTHOR

Andrea Telatin <proch@cpan.org>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2023 by Andrea Telatin.

This is free software, licensed under:

The MIT (X11) License