NAME

list2mapper.pl - Build final id mapper from id list using the NCBI Taxonomy database

VERSION

version 0.242020

USAGE

list2mapper.pl --taxdir=<dir> <infiles> [optional arguments]

REQUIRED ARGUMENTS

<infiles>

Path to input IDL files [repeatable argument].

--taxdir=<dir>

Path to local mirror of the NCBI Taxonomy database.

OPTIONAL ARGUMENTS

--from-must

Consider the input file as generated by ed/treeplot [default: no]. Currently, this switches to the legacy .lis format (instead of the modern .idl format).

--append-acc

Append accession (or gi) number to organism name [default: no].

--version

--usage

--help

--man

Print the usual program information

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.