NAME

Bio::Chado::Schema::Result::Phylogeny::Phylotree

NAME

Bio::Chado::Schema::Result::Phylogeny::Phylotree - Global anchor for phylogenetic tree.

ACCESSORS

phylotree_id

data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'phylotree_phylotree_id_seq'

dbxref_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 0

name

data_type: 'varchar'
is_nullable: 1
size: 255

type_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 1

Type: protein, nucleotide, taxonomy, for example. The type should be any SO type, or "taxonomy".

analysis_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 1

comment

data_type: 'text'
is_nullable: 1

RELATIONS

phylonodes

Type: has_many

Related object: Bio::Chado::Schema::Result::Phylogeny::Phylonode

phylonode_relationships

Type: has_many

Related object: Bio::Chado::Schema::Result::Phylogeny::PhylonodeRelationship

type

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Cv::Cvterm

analysis

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Companalysis::Analysis

dbxref

Type: belongs_to

Related object: Bio::Chado::Schema::Result::General::Dbxref

phylotree_pubs

Type: has_many

Related object: Bio::Chado::Schema::Result::Phylogeny::PhylotreePub

AUTHOR

Robert Buels <rbuels@cpan.org>

COPYRIGHT AND LICENSE

This software is copyright (c) 2011 by Robert Buels.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.

cpanm Bio::Chado::Schema

perl -MCPAN -e shell
install Bio::Chado::Schema