0.180190 2018-01-19 10:00:47+01:00 Europe/Brussels
- Changes:
- Ali: improved consistency of guessing default value (always on)
- Seq: ungapped seqs ending in '*' are now trimmed and considered non-aligned
- Fixes:
- Ali::Temporary: fixed regression bug preventing IdList application
- GeneticCode::Factory: tests should now pass on more platforms
- PostPred::Composition: tests should now pass on more platforms
0.180140 2018-01-14 22:36:55+01:00 Europe/Brussels
- Additions
- Ali::Temporary: new args attribute (to fine-tune FASTA file creation)
- Ali::Temporary: improved documentation
0.173620 2017-12-29 00:58:54+01:00 Europe/Brussels
- Additions
- Ali: new clone method
- Ali: improved documentation
- Changes:
- Tree: shorten_ids/restore_ids now ignore missing ids in IdMapper
- Fixes
- Rates: tests should now pass on more platforms
- Taxonomy: GCA-based taxon ids now retain their true taxonomic rank
0.173500 2017-12-17 00:35:51+01:00 Europe/Brussels
- Additions
- binaries: new script split-matrix.pl (to extract genes from a supermatrix)
- Changes
- Taxonomy: LCA inference algorithm can now follow a majority-rule approach
- Fixes
- Taxonomy: tests are now disabled by default
0.173470 2017-12-13 09:14:04+01:00 Europe/Brussels
- first release