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Author Module Permissions for MNSMAR
Module (105)
Owner (1)
Co-Maintainers (0)
CLIPSeqTools
MNSMAR
CLIPSeqTools::App
MNSMAR
CLIPSeqTools::App::all
MNSMAR
CLIPSeqTools::App::cluster_size_and_score_distribution
MNSMAR
CLIPSeqTools::App::conservation_distribution
MNSMAR
CLIPSeqTools::App::count_reads_on_genic_elements
MNSMAR
CLIPSeqTools::App::distribution_on_genic_elements
MNSMAR
CLIPSeqTools::App::distribution_on_introns_exons
MNSMAR
CLIPSeqTools::App::export_bed
MNSMAR
CLIPSeqTools::App::genome_coverage
MNSMAR
CLIPSeqTools::App::genomic_distribution
MNSMAR
CLIPSeqTools::App::nmer_enrichment_over_shuffled
MNSMAR
CLIPSeqTools::App::nucleotide_composition
MNSMAR
CLIPSeqTools::App::reads_long_gaps_size_distribution
MNSMAR
CLIPSeqTools::App::size_distribution
MNSMAR
CLIPSeqTools::CompareApp
MNSMAR
CLIPSeqTools::CompareApp::all
MNSMAR
CLIPSeqTools::CompareApp::compare_counts
MNSMAR
CLIPSeqTools::CompareApp::join_tables
MNSMAR
CLIPSeqTools::CompareApp::libraries_overlap_stats
MNSMAR
CLIPSeqTools::CompareApp::libraries_relative_read_density
MNSMAR
CLIPSeqTools::PlotApp
MNSMAR
CLIPSeqTools::PlotApp::cluster_size_and_score_distribution
MNSMAR
CLIPSeqTools::PlotApp::conservation_distribution
MNSMAR
CLIPSeqTools::PlotApp::distribution_on_genic_elements
MNSMAR
CLIPSeqTools::PlotApp::distribution_on_introns_exons
MNSMAR
CLIPSeqTools::PlotApp::genomic_distribution
MNSMAR
CLIPSeqTools::PlotApp::libraries_relative_read_density
MNSMAR
CLIPSeqTools::PlotApp::nucleotide_composition
MNSMAR
CLIPSeqTools::PlotApp::reads_long_gaps_size_distribution
MNSMAR
CLIPSeqTools::PlotApp::scatterplot
MNSMAR
CLIPSeqTools::PlotApp::size_distribution
MNSMAR
CLIPSeqTools::PreprocessApp
MNSMAR
CLIPSeqTools::PreprocessApp::all
MNSMAR
CLIPSeqTools::PreprocessApp::annotate_with_conservation
MNSMAR
CLIPSeqTools::PreprocessApp::annotate_with_deletions
MNSMAR
CLIPSeqTools::PreprocessApp::annotate_with_file
MNSMAR
CLIPSeqTools::PreprocessApp::annotate_with_genic_elements
MNSMAR
CLIPSeqTools::PreprocessApp::cleanup_alignment
MNSMAR
CLIPSeqTools::PreprocessApp::collapse_fastq
MNSMAR
CLIPSeqTools::PreprocessApp::cut_adaptor
MNSMAR
CLIPSeqTools::PreprocessApp::sam_to_sqlite
MNSMAR
CLIPSeqTools::PreprocessApp::star_alignment
MNSMAR
CLIPSeqTools::PreprocessApp::trim_fastq
MNSMAR
CLIPSeqTools::Role::Option::Genes
MNSMAR
CLIPSeqTools::Role::Option::Library
MNSMAR
CLIPSeqTools::Role::Option::OutputPrefix
MNSMAR
CLIPSeqTools::Role::Option::Plot
MNSMAR
CLIPSeqTools::Role::Option::ReferenceLibrary
MNSMAR
CLIPSeqTools::Role::Option::Transcripts
MNSMAR
GenOO
MNSMAR
GenOO::Data::DB::Connector
MNSMAR
GenOO::Data::DB::DBIC::Species::Schema
MNSMAR
GenOO::Data::DB::DBIC::Species::Schema::Result::Draft
MNSMAR
GenOO::Data::DB::DBIC::Species::Schema::SampleResultBase::v1
MNSMAR
GenOO::Data::DB::DBIC::Species::Schema::SampleResultBase::v2
MNSMAR
GenOO::Data::DB::DBIC::Species::Schema::SampleResultBase::v3
MNSMAR
GenOO::Data::File::BED
MNSMAR
GenOO::Data::File::BED::Record
MNSMAR
GenOO::Data::File::FASTA
MNSMAR
GenOO::Data::File::FASTA::Record
MNSMAR
GenOO::Data::File::FASTQ
MNSMAR
GenOO::Data::File::FASTQ::Record
MNSMAR
GenOO::Data::File::GFF
MNSMAR
GenOO::Data::File::GFF::Record
MNSMAR
GenOO::Data::File::SAM
MNSMAR
GenOO::Data::File::SAM::Cigar
MNSMAR
GenOO::Data::File::SAM::CigarAndMDZ
MNSMAR
GenOO::Data::File::SAM::MDZ
MNSMAR
GenOO::Data::File::SAM::Record
MNSMAR
GenOO::Data::Structure::DoubleHashArray
MNSMAR
GenOO::Exon
MNSMAR
GenOO::Gene
MNSMAR
GenOO::GeneCollection::Factory
MNSMAR
GenOO::GeneCollection::Factory::FromTranscriptCollection
MNSMAR
GenOO::GeneCollection::Factory::GTF
MNSMAR
GenOO::GenomicRegion
MNSMAR
GenOO::Helper::MyMath
MNSMAR
GenOO::Intron
MNSMAR
GenOO::Junction
MNSMAR
GenOO::Module::Search::Binary
MNSMAR
GenOO::Region
MNSMAR
GenOO::RegionCollection
MNSMAR
GenOO::RegionCollection::Factory
MNSMAR
GenOO::RegionCollection::Factory::BED
MNSMAR
GenOO::RegionCollection::Factory::DBIC
MNSMAR
GenOO::RegionCollection::Factory::RegionArray
MNSMAR
GenOO::RegionCollection::Factory::Requires
MNSMAR
GenOO::RegionCollection::Factory::SAM
MNSMAR
GenOO::RegionCollection::Type::DBIC
MNSMAR
GenOO::RegionCollection::Type::DoubleHashArray
MNSMAR
GenOO::Spliceable
MNSMAR
GenOO::Transcript
MNSMAR
GenOO::Transcript::CDS
MNSMAR
GenOO::Transcript::Part
MNSMAR
GenOO::Transcript::UTR3
MNSMAR
GenOO::Transcript::UTR5
MNSMAR
GenOO::TranscriptCollection
MNSMAR
GenOO::TranscriptCollection::Factory
MNSMAR
GenOO::TranscriptCollection::Factory::FromGeneCollection
MNSMAR
GenOO::TranscriptCollection::Factory::GTF
MNSMAR
GenOOx::Data::File::SAMbwa
MNSMAR
GenOOx::Data::File::SAMbwa::Record
MNSMAR
GenOOx::Data::File::SAMstar
MNSMAR
GenOOx::Data::File::SAMstar::Record
MNSMAR
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