query_entity_OTU
Query the entity OTU.
An OTU (Organism Taxonomic Unit) is a named group of related genomes.
Example:
query_entity_OTU -a Related entities
The OTU entity has the following relationship links:
Command-Line Options
- -is field,value
-
Limit the results to entities where the given field has the given value.
- -like field,value
-
Limit the results to entities where the given field is LIKE (in the sql sense) the given value.
- -op operator,field,value
-
Limit the results to entities where the given field is related to the given value based on the given operator.
The operators supported are as follows. We provide text based alternatives to the comparison operators so that extra quoting is not required to keep the command-line shell from confusing them with shell I/O redirection operators.
- -a
-
Return all fields.
- -h
-
Display a list of the fields available for use.
- -fields field-list
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Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:
Output Format
The standard output is a tab-delimited file containing a column for each requested field.