query_entity_Role

Query the entity Role.

A role describes a biological function that may be fulfilled by a feature. One of the main goals of the database is to assign features to roles. Most roles are effected by the construction of proteins. Some, however, deal with functional regulation and message transmission.

Example:

query_entity_Role -a 

The Role entity has the following relationship links:

DeterminesFunctionOf Family
HasAsExemplar Feature
IsConsistentTo EcNumber
IsFunctionalIn Feature
IsIncludedIn Subsystem
IsRoleOf SSCell
Triggers Complex

Command-Line Options

-is field,value

Limit the results to entities where the given field has the given value.

-like field,value

Limit the results to entities where the given field is LIKE (in the sql sense) the given value.

-op operator,field,value

Limit the results to entities where the given field is related to the given value based on the given operator.

The operators supported are as follows. We provide text based alternatives to the comparison operators so that extra quoting is not required to keep the command-line shell from confusing them with shell I/O redirection operators.

< or lt
> or gt
<= or le
>= or ge
=
LIKE
-a

Return all fields.

-h

Display a list of the fields available for use.

-fields field-list

Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:

hypothetical

Output Format

The standard output is a tab-delimited file containing a column for each requested field.