/ 
NanoB2B-NER-1.01
River stage zero No dependents
/ README

NanoB2B::NNER

SYNOPSIS

NNER takes a nanoparticle article from the END database and searches for
the nanoparticle based entity characteristics to create two ARFF
files [train and test] using k-fold cross validation. WEKA is run
on these ARFF files and an accuracy and customized results file is made

INSTALL

To install these modules run:

  perl Makefile.PL
  make
  make test
  make install

This will install the modules in the standard locations. You will, 
most probably, require root privileges to install in standard system
directories. To install in a non-standard directory, specify a prefix
during the 'perl Makefile.PL' stage as:

  perl Makefile.PL PREFIX=/home

It is possible to modify other parameters during installation. The
details of these can be found in the ExtUtils::MakeMaker
documentation. However, it is highly recommended not messing 
around with other parameters, unless you know what you're doing.

CONTENTS

All the modules that will be installed in the Perl system directory are
present in the '/lib' directory tree of the package. These include the
semantic relatedness modules -- 

  NanoB2B/NER.pm 

-- present in the lib/ subdirectory. All these modules, once installed
in the Perl system directory, can be directly used by Perl programs.

The package contains a utils/ directory that contain Perl utility 
programs. These utilities use the modules or provide some supporting
functionality.

  nanob2b-ner.pl         -- simple example of using the module

CONFIGURATION

Configuration details that will help the user understand the packages dependendies.

If you are using the UMLS or WordNet, descriptions of those and what aspects of the resources your are using go here.

If you have some specific parameters, details of those can go here. For example if you have a configuration file that the user can modify.

Copyright (C) 2017 Megan Charity & Bridget T McInnes

This suite of programs is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License as published
by the Free Software Foundation; either version 2 of the License, or (at
your option) any later version.

This program is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
General Public License for more details.

You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.

Note: The text of the GNU General Public License is provided in the file
'GPL.txt' that you should have received with this distribution.

SEE ALSO

http://search.cpan.org/dist/NanoB2B-NNER

CONTACT US

If you have any trouble installing and using NanoB2B-NNER, please contact us via the users mailing list :

Megan Charity <charityml@vcu.edu>

You may also contact us directly if you prefer :

Megan Charity: charityml at vcu.edu
Bridget T. McInnes: btmcinnes at vcu.edu

AUTHORS

Megan Charity, Virginia Commonwealth University
charityml at vcu.edu

Bridget T McInnes, University of Minnesota Twin Cities
bthomson at cs.umn.edu

Copyright (C) 2017 Megan Charity & Bridget T. McInnes

Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.2 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts.

Note: a copy of the GNU Free Documentation License is available on the web at:

http://www.gnu.org/copyleft/fdl.html

and is included in this distribution as FDL.txt.