Changes for version 1.07 - 2025-06-05

  • Revived --patient-of-interest (--poi) option
  • Updated Dockerfile to use perl:stable-bookworm
  • Switched cpan-publish.yml from ubuntu-latest to ubuntu-22.04
  • Fixed issue with --prp and BFF
  • bff-pxf-simulator:
    • PXF: Fixed 'procedure.term.id' with 'procedure.code.id'

Modules

A module that performs semantic similarity in PXF/BFF data structures and beyond (JSON|YAML)

Provides

in utils/bff_pxf_simulator/Ontologies.pm
in lib/Pheno/Ranker/Compare.pm
in lib/Pheno/Ranker/Graph.pm
in lib/Pheno/Ranker/IO.pm
in lib/Pheno/Ranker/Metrics.pm