AUTHOR
Luis M. Rodriguez-R < lmrodriguezr at gmail dot com >
DESCRIPTION
Detects (or predicts) loci at the given genomes. Loci identified must be defined by a .bme file (see examples for files in the proper format). If used with vntrs.bme is similar to the first part of polloc_vntrs.pl.
LICENSE
This script is distributed under the terms of The Artistic License. See LICENSE.txt for details.
SYNOPSIS
perl polloc_detect.pl arguments
The arguments must be in the following order:
- Configuration
-
The configuration file (a .bme or .cfg file).
- Output GFF
-
A path to the output GFF to be generated.
- Inseqs
-
All the following arguments will be treated as input files. Each file is assumed to contain a genome (that can contain one or more sequence) in [multi-]fasta format.
Run perl polloc_vntrs.pl without arguments to see the help message.