/ Bio::Gonzales::Seq::Filter::ProteinCleaner

NAME

Bio::Gonzales::Seq::Filter::ProteinCleaner - clean protein sequences

SYNOPSIS

my $pc = Bio::Gonzales::Seq::Filter::ProteinCleaner->new(no_desc => 1, uncommon_aa => 1, terminal => 1);
my $seqs = $pc->clean(@seqs)

Remove or replace strings from protein sequences that usually confuse 3rd party software

$seqs = $pc->clean(@seqs): Clean the sequences @seqs. Works on the objects.

jw bargsten, <joachim.bargsten at wur.nl>

To install Bio::Gonzales, copy and paste the appropriate command in to your terminal.

cpanm Bio::Gonzales

perl -MCPAN -e shell
install Bio::Gonzales

For more information on module installation, please visit the detailed CPAN module installation guide.

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