NAME

Bio::MUST::Core::Tree - Thin wrapper around Bio::Phylo trees

VERSION

version 0.242020

SYNOPSIS

# TODO

DESCRIPTION

# TODO

METHODS

newick_str

all_seq_ids

shorten_ids

restore_ids

switch_attributes_and_labels_for_terminals

switch_attributes_and_labels_for_internals

switch_attributes_and_labels_for_entities

switch_branch_lengths_and_labels_for_entities

collapse_subtrees

get_node_that_maximizes

root_tree

match_branch_lengths

load

store

store_itol_datasets

store_figtree

store_arb

store_grp

store_tpl

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

CONTRIBUTOR

Valerian LUPO <valerian.lupo@doct.uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.