NAME
Bio::Polloc::Rule::pattern - A rule determined by a pattern
AUTHOR - Luis M. Rodriguez-R
Email lmrodriguezr at gmail dot com
IMPLEMENTS OR EXTENDS
PUBLIC METHODS
Methods provided by the package
new
The basic initialization method
execute
Executes the search and returns the loci.
Arguments
The sequence (-seq) as a Bio::Seq or a Bio::SeqIO object.
Returns
An array reference populated with Bio::Polloc::Locus::pattern objects.
stringify_value
Produces a string with the value of the rule.
value
Arguments
A str, hashref or arrayref. The supported keys are:
Return
Value (hashref or undef).
INTERNAL METHODS
Methods intended to be used only within the scope of Bio::Polloc::*
_parameters
_executable
Gets the executable of fuzznuc.