NAME

EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation

SYNOPSIS

EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation contains two fields- value
and normalised_value

my $annotationToMatch =
EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation->new( value => $string_to_match );

METHODS

normalise()

Normalises a string by changing it lowercase and splitting into 4-grams.

compare()

Counts how many n-grmas are shared between annotations

AUTHOR

Emma Hastings , <ehastings@cpan.org>

ACKNOWLEDGEMENTS

Tomasz Adamusiak <tomasz@cpan.org>

COPYRIGHT AND LICENSE

Copyright [2011] EMBL - European Bioinformatics Institute

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.