NAME
GO::Handlers::obj - parses GO files into GO object model
SYNOPSIS
DESCRIPTION
PUBLIC METHODS
graph
Usage -
my
$terms
=
$obj_handler
->graph->get_all_terms;
Synonym - g
Synonym - ontology
Returns - GO::Model::Graph object
Args -
as files are parsed, objects are created; depending on what kind of datatype is being parsed, the classes of the created objects will be different - eg GO::Model::Term, GO::Model::Association etc
the way to access all of thses is through the top level graph object
eg
$parser
= GO::Parser->new({
handler
=>
'obj'
});
$parser
->parse(
@files
);
my
$graph
=
$parser
->graph;