NAME
MyShortRead::SRBed - A perl class to deal with a short read dataset in BED file.
SYNOPSIS
use MyShortRead::SRBed;
my $srBed = new MyShortRead::SRBed;DESCRIPTION
This class is used to extract information from a short read BED file. It first
separates the whole file into small pieces of chromosome files and then do bin
and sliding window count. Before the object exists, you should call its member
function to delete all temporary chromosome files.EXPORT
This is an object-oriented module.SEE ALSO
MyShortRead::MyShortRead
MyShortRead::ChromBedAUTHOR
Li Shen, <shenli.sam@gmail.com>
COPYRIGHT AND LICENSE
Copyright (C) 2010-2013 by Li Shen
diffReps goes under GNU GPL v3: http://www.gnu.org/licenses/gpl.html