LICENSE

Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2024] EMBL-European Bioinformatics Institute

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

     http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

CONTACT

  Please email comments or questions to the public Ensembl
  developers list at <http://lists.ensembl.org/mailman/listinfo/dev>.

  Questions may also be sent to the Ensembl help desk at
  <http://www.ensembl.org/Help/Contact>.

NAME

Bio::EnsEMBL::PepDnaAlignFeature - Ensembl specific pep-dna pairwise alignment feature

SYNOPSIS

  See BaseAlignFeature

METHODS

transform

  Arg [1]    : none
  Example    : none
  Description: Overwrites Bio:EnsEMBL:Feature->transform as
               to give error message
  Status     : Stable

_hit_unit

  Arg [1]    : none
  Example    : none
  Description: PRIVATE implementation of abstract superclass method.  Returns
               3 as the 'unit' used for the hit sequence.
  Returntype : int
  Exceptions : none
  Caller     : Bio::EnsEMBL::BaseAlignFeature
  Status     : Stable

_query_unit

  Arg [1]    : none
  Example    : none
  Description: PRIVATE implementation of abstract superclass method.  Returns
               1 as the 'unit' used for the query sequence.
  Returntype : int
  Exceptions : none
  Caller     : Bio::EnsEMBL::BaseAlignFeature
  Status     : Stable