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Bio-EnsEMBL-112.0_56
River stage zero No dependents
/ Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node

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Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2024] EMBL-European Bioinformatics Institute

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

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NAME

Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node

DESCRIPTION

Instances of this class represent nodes in a centered immutable interval tree.

METHODS

new

Arg [1]     : scalar, $x_center
              The mid point of the intervals represented by the node
Arg [2]     : Arrayref of Bio::EnsEMBL::Utils::Interval instances
              Represents the set of intervals overlapping $x_center
Arg [3]     : Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node
              The left subtree
Arg [4]     : Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node
              The right subtree
Description : Constructor. Creates a new centered immutable interval tree node instance
Returntype  : Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node
Exceptions  : if $x_center is not a number or the remaining args are not of the
              correct type
Caller      : general

x_center

Arg []      : none
Description : Return the center point of the intervals represented by the node
Returntype  : scalar
Exceptions  : none
Caller      : general

s_center_beg

Arg []      : none
Description : Returns the set of intervals containing the center point sorted by their start point
Returntype  : Arrayref of Bio::EnsEMBL::Utils::Interval
Exceptions  : none
Caller      : general

s_center_end

Arg []      : none
Description : Returns the set of intervals containing the center point sorted by their end point
Returntype  : Arrayref of Bio::EnsEMBL::Utils::Interval
Exceptions  : none
Caller      : general

left

Arg []      : none
Description : Returns the node's left child
Returntype  : Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node
Exceptions  : none
Caller      : general
Arg []      : none
Description : Returns the node's right child
Returntype  : Bio::EnsEMBL::Utils::Tree::Interval::Immutable::Node
Exceptions  : none
Caller      : general