NAME

Bio::Roary::External::Segmasker - Wrapper around Segmasker for low complexity filtering

VERSION

version 2.2.5

SYNOPSIS

Wrapper around Segmasker for low complexity filtering

use Bio::Roary::External::Segmasker;

my $seg= Bio::Roary::External::Segmasker->new(
  fasta_file => 'contigs.fa',
);

$seg->run();

METHODS

output_file

Returns the path to the results file

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007