NAME

Bio::Roary::External::Revtrans - Wrapper around RevTrans

VERSION

version 2.3.2

SYNOPSIS

Take in a fasta file and create a temporary blast database.

use Bio::Roary::External::Revtrans;

my $blast_database= Bio::Roary::External::Revtrans->new(
  nucleotide_filename => 'contigs.fa',
  protein_filename  => 'proteins.faa'
  output_filename   => 'translated.fa.aln'
);

$blast_database->run();

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007