NAME

Bio::Roary::AccessoryClustering - Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters

VERSION

version 3.4.1

SYNOPSIS

Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters use Bio::Roary::AccessoryClustering;

my $obj = Bio::Roary::AccessoryClustering->new(
    input_file        => 'accessory_binary_genes.fa',
    identity           => 0.96,
    cpus => 10,
  );
$obj->sample_weights();

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007