NAME

Bio::Roary::AnnotateGroups - Take in a group file and assosiated GFF files for the isolates and update the group name to the gene name

VERSION

version 3.4.3

SYNOPSIS

Take in a group file and assosiated GFF files for the isolates and update the group name to the gene name use Bio::Roary::AnnotateGroups;

my $obj = Bio::Roary::AnnotateGroups->new(
  gff_files   => ['abc.gff','efg.gff'],
  output_filename   => 'example_output.fa',
  groups_filename => 'groupsfile',
);
$obj->reannotate;

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007