NAME
Phenyx::Utils::LSF::JobInfo
SYNOPSIS
DESCRIPTION
Get info from LSF submited jobs
LSF master can be remote (setting $SHELLCOMMANDPREFIX)
FUNCTIONS
parseBJobs($job1 [,$job2 [...]]);
parseBJobs("-a"); #or whatever bjobs arguments that produce a same output
issue a bjobs command a returns a hash jobid => hash corresponding to bjobs output
jobInfo($jobid, $tag);
Returns a tag for a job (tags are bjobs command header, i.e. EXEC_HOST, QUEUE...)
isJobStarted($jobid);
Returns is a given job has been started (STAT is (PEND|PSUSP|RUN|USUSP|SSUSP))
isJobRunning($jobid);
Returns is a given job is currently running (STAT is 'RUN')
isJobFinished($jobid);
Returns is a given job has completed (error or not) (STAT is (DONE|EXIT|ZOMBI))
GLOBAL VARIABLES
SHELLCOMMANDPREFIX
A shell prefix (typically 'ssh user@lsf.host.name') to be preprend to any bjobs or whatever command.t
EXAMPLES
See t/ directories
SEE ALSO
bsub
COPYRIGHT
Copyright (C) 2004-2005 Geneva Bioinformatics www.genebio.com
This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
AUTHORS
Alexandre Masselot, www.genebio.com