NAME
Bio::Factory::MapFactoryI - A Factory for getting markers
SYNOPSIS
# get a Map Factory somehow likely from Bio::MapIO system
while( my $map = $mapin->next_map ) {
print "map name is ", $map->name, " length is ",
$map->length, " ", $map->units, "\n";
$mapout->write_map($map);
}
DESCRIPTION
This interface describes the necessary minimum methods for getting Maps from a data stream. It also supports writing Map data back to a stream.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/MailList.shtml - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:
bioperl-bugs@bioperl.org
http://bioperl.org/bioperl-bugs/
AUTHOR - Jason Stajich
Email jason@bioperl.org
Describe contact details here
CONTRIBUTORS
Additional contributors names and emails here
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
next_map
Title : next_map
Usage : my $map = $factory->next_map;
Function: Get a map from the factory
Returns : L<Bio::Map::MapI>
Args : none
write_map
Title : write_map
Usage : $factory->write_map($map);
Function: Write a map out through the factory
Returns : none
Args : L<Bio::Map::MapI>