NAME
Bio::LiveSeq::Prim_Transcript - Prim_Transcript class for LiveSeq
SYNOPSIS
# documentation neededDESCRIPTION
Class for PRIM_TRANSCRIPT objects. They consist of a beginlabel, an endlabel (both referring to a LiveSeq DNA object) and a strand. The strand could be 1 (forward strand, default), -1 (reverse strand).
AUTHOR - Joseph A.L. Insana
Email: Insana@ebi.ac.uk, jinsana@gmx.net
Address:
EMBL Outstation, European Bioinformatics Institute
Wellcome Trust Genome Campus, Hinxton
Cambs. CB10 1SD, United Kingdom APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : $intron1=Bio::LiveSeq::Prim_Transcript->new(-seq => $objref,
-start => $startlabel,
-end => $endlabel,
-strand => 1
);
Function: generates a new Bio::LiveSeq::Prim_Transcript
Returns : reference to a new object of class Prim_Transcript
Errorcode -1
Args : two labels and an integer