UMLS-Interface-0.27

Documentation

findLeastCommonSubsumer.pl

This program finds the least common subsumer between two concepts.

findMaximumCuiDepth.pl

This program returns the maximum depth of a given CUI or term.

findMinimumCuiDepth.pl

This program returns the minimum depth of a given CUI or term.

findPathToRoot.pl

This program returns all possible paths from a given CUI to the root.

findShortestPath.pl

This program finds the shoretest path between two concepts.

getChildren.pl

This program returns all of a concepts children.

getCuiDef.pl

This program returns the definition of a concept or a term.

getParents.pl

This program returns all of a concepts parents.

getRelated.pl

This programs returns all CUIs of a given relation.

getRelations.pl

This program returns all of a concepts relations.

getStDef.pl

This program returns the definition of a semantic type.

getSts.pl

This program returns a concepts semantic type(s).

queryCui.pl

This program returns all associated terms of a concept.

queryTerm.pl

This program returns all the CUIs of a term.

removeConfigData.pl

This program removes the temporary table and associated files that are created based on the configuration file.

umlsCycles.pl

This program marks problematic relations defined by the user.

Modules

UMLS::Interface

Perl interface to the Unified Medical Language System (UMLS)

Other files

To install UMLS::Interface, copy and paste the appropriate command in to your terminal.

cpanm

cpanm UMLS::Interface

CPAN shell

perl -MCPAN -e shell
install UMLS::Interface

For more information on module installation, please visit the detailed CPAN module installation guide.

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Documentation

Modules

Other files

Module Install Instructions