NAME

leel.pl - The Elite of the Phylogenomic Back-Translators

VERSION

version 0.190820

USAGE

leel.pl <infiles> --config=<file> [optional arguments]

REQUIRED ARGUMENTS

<infiles>

Path to input ALI files [repeatable argument].

--config=<file>

Path to the configuration file specifying the run details.

In principle, several configuration file formats are available: XML, JSON, YAML. However, leel was designed with YAML in mind. See the test directory of the distribution for annotated examples of YAML files.

OPTIONAL ARGUMENTS

--verbosity=<level>

Verbosity level for logging to STDERR [default: 0]. Available levels range from 0 to 6. Level 6 corresponds to debugging mode.

--version

--usage

--help

--man

Print the usual program information

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.