NAME

clust2mapper.pl - Build id mapper from UCLUST/CD-HIT clusters for tree formatting

VERSION

version 0.181120

USAGE

clust2mapper.pl <infiles> --engine=<pgm> [optional arguments]

REQUIRED ARGUMENTS

<infiles>

Path to input UCLUST/CD-HIT cluster files [repeatable argument].

--engine=<pgm>

Engine used to generate the clusters. The following programs are available: cd-hit and uclust.

OPTIONAL ARGUMENTS

--sep[arator]=<str>

Separator used to join members ids for each cluster [default: '/'].

--version

--usage

--help

--man

Print the usual program information

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.