NAME

OBO::APO::APO_ID_Term_Map - A map between APO IDs and term names.

SYNOPSIS

use OBO::APO::APO_ID_Term_Map;

$apo_id_set = APO_ID_Term_Map -> new;

$apo_id_set->file("ontology.ids");

$file = $apo_id_set -> file;

$size = $apo_id_set -> size;

$apo_id_set->file("APO");

if ($apo_id_set->add("APO:C1234567")) { ... }

$new_id = $apo_id_set->get_new_id("APO", "C");

DESCRIPTION

The OBO::APO::APO_ID_Term_Map class implements a map for storing APO IDs and their corresponding names.

AUTHOR

Erick Antezana, <erick.antezana -@- gmail.com>

COPYRIGHT AND LICENSE

Copyright (c) 2006-2012 by Erick Antezana

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.

get_new_id

Usage    - $map->get_new_id("APO", "P", "cell cycle") or $map->get_new_id("APO", "Pa", "cell cycle")
Returns  - a new APO ID (string)
Args     - idspace (string), subnamespace (string), term (string)
Function - get a new APO ID and insert it (put) into this map