NAME

get_lowest_common_ancestor.pl - the lowest common ancestor (LCA) of two terms in a given OBO ontology.

DESCRIPTION

Gets the lowest common ancestor (LCA) of two terms in a given OBO-formatted ontology. This script is generally used with taxonomies (e.g. NCBI taxonomy). This version only gets the LCA computed through the 'is_a' relationship type. Also, it assumes that there is only one root term in the ontology.

AUTHOR

Erick Antezana, <erick.antezana -@- gmail.com>

COPYRIGHT AND LICENSE

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.

To install OBO::Util::Set, copy and paste the appropriate command in to your terminal.

cpanm

cpanm OBO::Util::Set

CPAN shell

perl -MCPAN -e shell
install OBO::Util::Set

For more information on module installation, please visit the detailed CPAN module installation guide.

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COPYRIGHT AND LICENSE

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