—#!/usr/bin/env perl
# $Id: obo2owl.pl 2011-02-29 erick.antezana $
#
# Script : obo2owl.pl
#
# Purpose : Converts a file from OBO to OWL.
#
# Usage : obo2owl.pl my_ontology.obo > my_ontology.owl http://www.myurl.org http://www.myurl.org/oboInOwl#
#
# License : Copyright (c) 2006-2014 by Erick Antezana. All rights reserved.
# This program is free software; you can redistribute it and/or
# modify it under the same terms as Perl itself.
#
# Contact : Erick Antezana <erick.antezana -@- gmail.com>
#
###############################################################################
use
Carp;
use
strict;
use
warnings;
my
$my_parser
= OBO::Parser::OBOParser->new();
my
$ontology
=
$my_parser
->work(
shift
);
my
$url
=
shift
;
my
$oboinowlurl
=
shift
;
$ontology
->export(
'owl'
, \
*STDOUT
, \
*STDERR
,
$url
,
$oboinowlurl
);
exit
0;
__END__
=head1 NAME
obo2owl.pl - OBO to OWL translator.
=head1 DESCRIPTION
This script transforms an OBO file (spec 1.2) into OWL (cf. oboinowl mapping).
Use the owl2obo.pl to get the round-trip transformation.
=head1 AUTHOR
Erick Antezana, E<lt>erick.antezana -@- gmail.comE<gt>
=head1 COPYRIGHT AND LICENSE
Copyright (c) 2006-2014 by Erick Antezana
This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself, either Perl version 5.8.7 or,
at your option, any later version of Perl 5 you may have available.
=cut