Changes for version 0.07 - 2015-11-11
- Added in a feature for all local variables to evaluated in process template, not just INPUT/OUTPUT
- INPUT/OUTPUT, indir/outdir are still special variables
- Can now do things like
- local:
- MYLOCALTHING: "{$self->indir}/{$sample}_MYLOCALTHING.txt"
Modules
A very opinionated template based workflow writer.
A very opinionated template based bioinformatics workflow writer for Drake.
Examples
- example/SAMPLE1.csv
- example/SAMPLE2.csv
- example/bydir/DATA/SAMPLE1/SAMPLE1.csv
- example/bydir/DATA/SAMPLE2/SAMPLE2.csv
- example/bydir/config.yml
- example/bydir/config2.yml
- example/bydir/out.sh
- example/bydir/out2.sh
- example/bydir/try
- example/bydir/try.out
- example/config.yml
- example/drake.full.png
- example/drake.log
- example/drake.min.png
- example/drake.yml
- example/gemini.yml
- example/run-workflow.sh
- example/try
- example/workflow.full.drake
- example/workflow.min.drake