Changes for version 1.05
- Bio::DB::Sam->seq_id() method no longer lower-cases reference names.
- Quashed enormous memory leak in the pileup() function.
Modules
Add high-level methods to Bio::DB::Bam::Alignment
The SAM/BAM alignment object
Object passed to pileup() callback
Add high-level methods to Bio::DB::Bam::Pileup
Object representing the query portion of a BAM/SAM alignment
Read SAM/BAM database files
Constants for use with SAM/BAM
Provides
in lib/Bio/DB/Sam.pm
in lib/Bio/DB/Bam/FetchIterator.pm
in lib/Bio/DB/Bam/ReadIterator.pm
in lib/Bio/DB/Bam/AlignWrapper.pm
in lib/Bio/DB/Bam/Target.pm
in lib/Bio/DB/Sam.pm
in lib/Bio/DB/Sam/Segment.pm
in lib/Bio/DB/Sam.pm