NAME

Bio::DNA::Incomplete - Match incompletely specified bases in nucleic acid sequences

VERSION

version 0.002

FUNCTIONS

match_pattern($pattern, @things_to_test)

Returns the list of sequences that match $pattern.

pattern_to_regex($pattern)

Returns a compiled regex which is the equivalent of the pattern.

pattern_to_regex_string($pattern)

Returns a regex string which is the equivalent of the pattern.

all_possibilities($pattern)

Returns a list of all possible sequences that can match the pattern.

SEE ALSO

• Text::Glob

AUTHOR

Leon Timmermans <leont@cpan.org>

COPYRIGHT AND LICENSE

This software is copyright (c) 2011 by Leon Timmermans, Utrecht University.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.