NAME

Bio::Polloc::Locus::pattern - A loci matching a pattern.

AUTHOR - Luis M. Rodriguez-R

Email lmrodriguezr at gmail dot com

APPENDIX

Methods provided by the package

new

Initialization method.

Arguments

The generic arguments from Bio::Polloc::LocusI, plus:

-pattern str

The query pattern (see Bio::Polloc::Rule::pattern).

-score int

The number of matched nucleotides.

pattern

Gets/sets the query pattern.

score

Gets/sets the score (number of matched nucleotides).

INTERNAL METHODS

Methods intended to be used only within the scope of Bio::Polloc::*

_initialize