NAME

CLIPSeqTools::Role::Option::Library - Role to enable reading a library with reads from the command line

SYNOPSIS

Role to enable reading a library with reads from the command line

Defines options.
    -driver <Str>          driver for database connection (eg. mysql, SQLite).
    -database <Str>        database name or path to database file for file
                           based databases (eg. SQLite).
    -table <Str>           database table.
    -host <Str>            hostname for database connection.
    -user <Str>            username for database connection.
    -password <Str>        password for database connection.
    -records_class <Str>   type of records stored in database (Default:
                           GenOO::Data::DB::DBIC::Species::Schema::
                           SampleResultBase::v3).
    -filter <Filter>       filter library. Option can be given multiple times.
                           Syntax: column_name="pattern"
                           e.g. -filter deletion="def" -filter rmsk="undef"
                           to keep reads with deletions and not repeat
                           masked.  e.g.  -filter query_length=">31" -filter
                           query_length="<=50" to keep reads longer than 31
                           and shorter or   equal to 50.  Supported
                           operators: >, >=, <, <=, =, !=, def, undef.

Provides attributes.
    reads_collection      reads collection that is read from the specified
                          source.