NAME

Convert::Pheno - A module that performs semantic similarity in PXF/BFF data structures and beyond (JSON|YAML)

SYNOPSIS

use Pheno::Ranker;

# Create object
my $ranker = Pheno::Ranker->new(
    {
        reference_files  => ['individuals.json'],
        out_file => 'matrix.txt'
    }
);

# Run it (output are text files)
$ranker->run;

DESCRIPTION

We recommend using the included command-line interface.

For a better description, please read the following documentation:

General:

https://cnag-biomedical-informatics.github.io/pheno-ranker

Command-Line Interface:

https://github.com/CNAG-Biomedical-Informatics/pheno-ranker#readme

CITATION

The author requests that any published work that utilizes Pheno-Ranker includes a cite to the the following reference:

Rueda, M. et al. "Advancing Semantic Similarity Analysis of Phenotypic Data Stored in GA4GH Standards and Beyond. (2023) Submitted.

AUTHOR

Written by Manuel Rueda, PhD. Info about CNAG can be found at https://www.cnag.eu.

METHODS

There is only method named c<run>. See above the syntax.

For more information check the documentation:

https://cnag-biomedical-informatics.github.io/pheno-ranker

COPYRIGHT

This PERL file is copyrighted. See the LICENSE file included in this distribution.