NAME

Bio::RNA::RNAaliSplit - Split and deconvolute structural RNA multiple sequence alignments

VERSION

Version 0.04

SYNOPSIS

This module is a Moose handler for horizontal splitting of structural RNA multiple sequence alignments (MSA). It employs third party tools (RNAalifold, RNAz, R-scape) for classification of subalignments, each folding into a common consensus structure.

AUTHOR

Michael T. Wolfinger, <michael at wolfinger.eu>

BUGS

Please report any bugs or feature requests to bug-bio-rna-rnaalisplit at rt.cpan.org, or through the web interface at http://rt.cpan.org/NoAuth/ReportBug.html?Queue=Bio-RNA-RNAaliSplit. I will be notified, and then you'll automatically be notified of progress on your bug as I make changes.

SUPPORT

You can find documentation for this module with the perldoc command.

perldoc Bio::RNA::RNAaliSplit

You can also look for information at:

• RT: CPAN's request tracker (report bugs here)

  http://rt.cpan.org/NoAuth/Bugs.html?Dist=Bio-RNA-RNAaliSplit

• AnnoCPAN: Annotated CPAN documentation

  http://annocpan.org/dist/Bio-RNA-RNAaliSplit

• CPAN Ratings

  http://cpanratings.perl.org/d/Bio-RNA-RNAaliSplit

• Search CPAN

  http://search.cpan.org/dist/Bio-RNA-RNAaliSplit/

LICENSE AND COPYRIGHT

Copyright 2017 Michael T. Wolfinger <michael@wolfinger.eu> and <michael.wolfinger@univie.ac.at>

This program is free software; you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details.

You should have received a copy of the GNU Affero General Public License along with this program. If not, see http://www.gnu.org/licenses/.