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Data-Babel-1.11
River stage zero No dependents

Changes for version 1.11 - 2013-06-18

  • New features
  • can specify history in IdType, rather than just in Master
  • new 'show_schema_graph' method Bug fixes
  • in 'validate', check for unmatched ids has to be case insensitive because MySQL does case intensive comparisons, e.g., searching for 'htt' as gene_symbol
  • detect isolated IdTypes, ie, IdTypes not contained in any MapTable. previously, load_implicit_masters would generate illegal empty query

Changes for version 1.11_05 - 2013-06-15

  • RC2 for 1.11 Bug fixes (tests)
  • select_ur was setting status field to undef (should be 0) when invalid input id was not lower case. bug introduced by support for case insensitive comparisons in 1.11_01 Improved tests
  • added 036.validate_case to test case insensitive validate
  • added tests for case insensitive non-matching ids in 112.validate_case

Changes for version 1.11_04 - 2013-06-14

  • RC1 for 1.11 Bug fixes (tests)
  • replaced calls to cmp_set with cmp_set_quietly to avoid superfluous test output. error introduced in 1.11_03

Changes for version 1.11_03 - 2013-06-13

  • Bug fixes (tests)
  • fixed more tests that failed because of hash key randomization in 5.18. thanks again to CPAN testers for finding this problem!

Changes for version 1.11_02 - 2013-06-12

  • Bug fixes (tests)
  • fixed tests that failed because of hash key randomization in 5.18. thanks to CPAN testers for finding this problem!

Changes for version 1.11_01 - 2013-06-11

  • Bug fixes
  • in 'validate', check for unmatched ids has to be case insensitive because MySQL does case intensive comparisons, e.g., searching for 'htt' as gene_symbol
  • detect isolated IdTypes, ie, IdTypes not contained in any MapTable. previously, load_implicit_masters would generate illegal empty query New features
  • can specify history in IdType, rather than just in Master
  • new 'show_schema_graph' method Deleted vestigal logging code, mostly from Data::Babel::Base

Modules

Data::Babel
Translator for biological identifiers

Provides

Data::Babel::Base
in lib/Data/Babel/Base.pm
Data::Babel::Config
in lib/Data/Babel/Config.pm
Data::Babel::HAH_MultiValued
in lib/Data/Babel/HAH_MultiValued.pm
Data::Babel::HAH_MultiValued::helper
in lib/Data/Babel/HAH_MultiValued.pm
Data::Babel::HAH_MultiValued::tie
in lib/Data/Babel/HAH_MultiValued.pm
Data::Babel::IdType
in lib/Data/Babel/IdType.pm
Data::Babel::MapTable
in lib/Data/Babel/MapTable.pm
Data::Babel::Master
in lib/Data/Babel/Master.pm

Examples

Other files