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Bioinfo-0.1.13
River stage zero No dependents

Changes for version 0.1.13

  • Change: fdf2fc3808a6633a2b20da82ee9a631125bc491e Author: Yan Xueqing <yanxueqing621@163.com> Date : 2017-12-17 23:50:29 +0000
    • Added evalue and outfmt parameters

Documentation

biotools
a bioinformatics toolkit that I used often

Modules

Bioinfo
my perl module and CLIs for Biology
Bioinfo::App
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Blast
various operator related to Blast+
Bioinfo::App::Cmd::Blast::Cmd::ParseXML
parse XML file of blast+(with outfmt=5) into tabular format
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmit
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmitB
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Fasta
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::GetByID
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::Split
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::SplitBlast
my perl module and CLIs for Biology
Bioinfo::Fasta
get one or more sequences from a FASTA file quickly.
Bioinfo::PBS
my perl module and CLIs for Biology
Bioinfo::PBS::Queue
used to submit a batch of task to Torque cluster

Other files