NAME

Bio::Chado::Schema::Result::Map::Featurerange

DESCRIPTION

In cases where the start and end of a mapped feature is a range, leftendf and rightstartf are populated. leftstartf_id, leftendf_id, rightstartf_id, rightendf_id are the ids of features with respect to which the feature is being mapped. These may be cytological bands.

NAME

Bio::Chado::Schema::Result::Map::Featurerange

ACCESSORS

featurerange_id

data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'featurerange_featurerange_id_seq'

featuremap_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 0

featuremap_id is the id of the feature being mapped.

feature_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 0

leftstartf_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 0

leftendf_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 1

rightstartf_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 1

rightendf_id

data_type: 'integer'
is_foreign_key: 1
is_nullable: 0

rangestr

data_type: 'varchar'
is_nullable: 1
size: 255

RELATIONS

featuremap

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Map::Featuremap

leftendf

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Sequence::Feature

rightstartf

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Sequence::Feature

rightendf

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Sequence::Feature

leftstartf

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Sequence::Feature

feature

Type: belongs_to

Related object: Bio::Chado::Schema::Result::Sequence::Feature

AUTHOR

Robert Buels <rbuels@cpan.org>

COPYRIGHT AND LICENSE

This software is copyright (c) 2011 by Robert Buels.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.

cpanm Bio::Chado::Schema

perl -MCPAN -e shell
install Bio::Chado::Schema