all_entities_Model
Return all instances of the Model entity.
A model specifies a relationship between sets of features and reactions in a cell. It is used to simulate cell growth and gene knockouts to validate annotations.
Example:
all_entities_Model -a would retrieve all entities of type Model and include all fields in the entities in the output.
Related entities
The Model entity has the following relationship links:
Command-Line Options
- -a
-
Return all fields.
- -h
-
Display a list of the fields available for use.
- -fields field-list
-
Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:
- mod_date
- name
- version
- type
- status
- reaction_count
- compound_count
- annotation_count
Output Format
The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.