all_entities_SSRow
Return all instances of the SSRow entity.
An SSRow (that is, a row in a subsystem spreadsheet) represents a collection of functional roles present in the Features of a single Genome. The roles are part of a designated subsystem, and the fids associated with each role are included in the row, That is, a row amounts to an instance of a subsystem as it exists in a specific, designated genome.
Example:
all_entities_SSRow -a would retrieve all entities of type SSRow and include all fields in the entities in the output.
Related entities
The SSRow entity has the following relationship links:
Command-Line Options
- -a
-
Return all fields.
- -h
-
Display a list of the fields available for use.
- -fields field-list
-
Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:
- curated
- region
Output Format
The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.