query_entity_Reagent
Query the entity Reagent.
This entity represents a compound as it is used by a specific reaction. A reaction involves many compounds, and a compound can be involved in many reactions. The reagent describes the use of the compound by a specific reaction.
Example:
query_entity_Reagent -a Related entities
The Reagent entity has the following relationship links:
Command-Line Options
- -is field,value
-
Limit the results to entities where the given field has the given value.
- -like field,value
-
Limit the results to entities where the given field is LIKE (in the sql sense) the given value.
- -op operator,field,value
-
Limit the results to entities where the given field is related to the given value based on the given operator.
The operators supported are as follows. We provide text based alternatives to the comparison operators so that extra quoting is not required to keep the command-line shell from confusing them with shell I/O redirection operators.
- -a
-
Return all fields.
- -h
-
Display a list of the fields available for use.
- -fields field-list
-
Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:
- stoichiometry
- cofactor
- compartment_index
- transport_coefficient
Output Format
The standard output is a tab-delimited file containing a column for each requested field.